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IDSAVERM_971 TypeCDS
From1232498 nt length1116
To1231383 aa length371
Gene pI9.12
Definitionputative simple sugar ABC transporter substrate-binding protein M.W (Da)38690
NotePF00532: Periplasmic binding proteins and sugar binding domain of the LacI family AseI frg.A
SignalP v.4.0Signal peptide | plot Categorytransport / binding proteins & lipoproteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
sgrSGR_6602 putative sugar uptake ABC transporter solute-binding protein4286.0e-151
scabSCAB63951 putative simple sugar ABC transporter substrate-binding protein1936.0e-59
mtubgi|15610135 hypothetical protein Rv2998 [Mycobacterium tuberculosis H37Rv]318.9e-02
ecoligi|16132049 putative D-ribose transport protein (ABC superfamily, peri_bind) [Escherichia coli K12]1717.2e-44

*sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; mtub, Mycobacterium tuberculosis H37Rv; ecoli, Escherichia coli K-12;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Peripla_BP_41Periplasmic binding protein domain96-344179.86.5e-53

Peripla_BP_11Periplasmic binding proteins and sugar binding domain of LacI family97-30966.03.4e-18

Peripla_BP_61Periplasmic binding protein114-33535.86.7e-09

Peripla_BP_31Periplasmic binding protein-like domain212-34034.71.8e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_020937915.1 ABC transporter substrate-binding protein [Streptomyces coll... 14560.0e+00
WP_234538322.1 ABC transporter substrate-binding protein [Streptomyces shen... 14540.0e+00
WP_143633715.1 ABC transporter substrate-binding protein [Streptomyces sp. ... 14500.0e+00
WP_046732998.1 ABC transporter substrate-binding protein [Streptomyces humi... 14480.0e+00
WP_189185679.1 ABC transporter substrate-binding protein [Streptomyces albi... 14480.0e+00
WP_055490774.1 ABC transporter substrate-binding protein [Streptomyces sp. ... 14450.0e+00
WP_151467292.1 substrate-binding domain-containing protein [Streptomyces tr... 14450.0e+00
WP_123439216.1 ABC transporter substrate-binding protein [Streptomyces sp. ... 14410.0e+00
WP_016430452.1 ABC transporter substrate-binding protein [Streptomyces sp. ... 14410.0e+00
WP_103547323.1 ABC transporter substrate-binding protein [Streptomyces popu... 14390.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2339 Seems to have no N-terminal signal seq.