| ID | SAVERM_992
| Type | CDS
|
| From | 1257609
| nt length | 1182
|
| To | 1258790
| aa length | 393
|
| Gene |
| pI | 9.84
|
| Definition | putative membrane protein, ribonuclease BN-like family
| M.W (Da) | 42628
|
| Note | PF03631: Ribonuclease BN-like family
| AseI frg. | A
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO0686 putative membrane protein | 479 | 5.0e-170
|
| sam | SAM23877_6857 putative membrane protein | 502 | 6.0e-180
|
| scab | SCAB43371 putative membrane protein, ribonuclease BN-like family | 526 | 0.0e+00
|
| nfar | nfa16420 ribonuclease | 354 | 6.5e-99
|
| cglu | gi|19552177 COG1295:Predicted multitransmembrane protein [Corynebacterium glutamicum] | 150 | 9.9e-38
|
| bsub | BG12924 yfkH; similar to transporter | 157 | 1.3e-39
|
| ecoli | gi|16131726 ribonuclease BN [Escherichia coli K12] | 67 | 1.6e-12
|
| paer | PA2751 [gene=PA2751] [prot=conserved hypothetical protein] [comment=PA2751] | 159 | 5.4e-40
|
*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Virul_fac_BrkB | 1 | Virulence factor BrkB | 103-359 | 224.2 | 1.9e-66
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_152888632.1 | YihY/virulence factor BrkB family protein [Streptomyces adus...
| 1447 | 0.0e+00 |
| GHD41756.1 | hypothetical protein GCM10010335_43850 [Streptomyces galbus]
| 1402 | 0.0e+00 |
| WP_137305026.1 | YihY/virulence factor BrkB family protein [Streptomyces lasa...
| 1395 | 0.0e+00 |
| WP_137304116.1 | YihY/virulence factor BrkB family protein [Streptomyces galb...
| 1391 | 0.0e+00 |
| WP_168375615.1 | YihY/virulence factor BrkB family protein [Streptomyces galb...
| 1388 | 0.0e+00 |
| WP_079152617.1 | YihY/virulence factor BrkB family protein [Streptomyces sp. ...
| 1387 | 0.0e+00 |
| WP_167526656.1 | MULTISPECIES: YihY/virulence factor BrkB family protein [Str...
| 1383 | 0.0e+00 |
| WP_079083749.1 | YihY/virulence factor BrkB family protein [Streptomyces long...
| 1383 | 0.0e+00 |
| WP_078602725.1 | MULTISPECIES: YihY/virulence factor BrkB family protein [Str...
| 1379 | 0.0e+00 |
| WP_190057947.1 | YihY/virulence factor BrkB family protein [Streptomyces echi...
| 1378 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.6710 | Seems to have no N-terminal signal seq.
|