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IDSAVERM_997 TypeCDS
From1262450 nt length672
To1263121 aa length223
Genesig13 pI9.75
Definitionputative RNA polymerase ECF-subfamily sigma factor M.W (Da)25502
NotePF08281: Sigma-70, region 4 AseI frg.A
SignalP v.4.0Non-secretory protein | plot CategoryRNA initiation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r4_21Sigma-70, region 4118-16957.47.5e-16

Sigma70_r41Sigma-70, region 4122-17031.67.9e-08

Sigma70_r21Sigma-70 region 222-8821.80.00011

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_237529136.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 8861.0e-119
WP_109881466.1 ECF-type sigma factor [Streptomyces sp. FT05W] >gb 4061.9e-46
WP_055546510.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 2784.8e-27
WP_046086520.1 sigma-70 family RNA polymerase sigma factor [Streptomyces an... 2768.2e-27
WP_046776918.1 sigma-70 family RNA polymerase sigma factor [Streptomyces ya... 2696.8e-26
WP_201870564.1 sigma-70 family RNA polymerase sigma factor [Streptomyces co... 2681.0e-25
WP_089508429.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 2671.5e-25
NUP44168.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp.] 2671.6e-25
WP_176182199.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 2672.0e-25
WP_014177593.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... 2645.5e-25

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1781 Seems to have no N-terminal signal seq.