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IDSCAB10281 TypeCDS
From8985761 nt length924
To8984838 aa length307
Gene pI5.22
Definitionputative DNA-binding protein M.W (Da)32345
Note AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1271 putative DNA-binding protein2148.0e-57
coelSCO0174 putative DNA-binding protein3302.0e-91

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF19181Domain of unknown function (DUF1918)1-5887.62.7e-25

Pyridox_ox_21Pyridoxamine 5'-phosphate oxidase180-30177.96.4e-22

HTH_311Helix-turn-helix domain98-15532.76.3e-08

Pyridox_oxidase1Pyridoxamine 5'-phosphate oxidase181-26629.75.1e-07

HTH_31Helix-turn-helix105-15525.01.3e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_060877885.1 XRE family transcriptional regulator [Streptomyces scabiei] 13970.0e+00
WP_059078530.1 XRE family transcriptional regulator [Streptomyces scabiei] ... 13460.0e+00
WP_045561862.1 XRE family transcriptional regulator [Streptomyces sp. Fxana... 12202.0e-168
WP_033527736.1 XRE family transcriptional regulator [Streptomyces galbus] 12151.5e-167
WP_060882549.1 MULTISPECIES: XRE family transcriptional regulator [Streptom... 12047.2e-166
WP_006131007.1 DNA-binding protein [Streptomyces gancidicus] >gb 10605.5e-144
WP_023544420.1 hypothetical protein [Streptomyces roseochromogenus] >gb 10423.2e-141
WP_085575891.1 XRE family transcriptional regulator [Streptomyces sp. 13-12... 10407.0e-141
WP_093906290.1 XRE family transcriptional regulator [Streptomyces sp. cf386... 10391.1e-140
WP_055633516.1 XRE family transcriptional regulator [Streptomyces griseorub... 10311.2e-139

PSORT result

LocalizationCertaintyPSORT said
Not Clear