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IDSCAB11501 TypeCDS
From8851065 nt length2145
To8853209 aa length714
Gene pI4.97
Definitionhypothetical protein M.W (Da)77836
Note AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7304 hypothetical protein12220.0e+00
coelSCO0928 hypothetical protein12180.0e+00
sgrSGR_709 conserved hypothetical protein11130.0e+00
saceSACE_7137 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)6330.0e+00
nfarnfa49160 hypothetical protein2697.0e-73

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

EAL1EAL domain456-698237.99.9e-71

GGDEF1Diguanylate cyclase, GGDEF domain279-435149.56e-44

PAS_41PAS fold164-26950.02.8e-13

PAS_91PAS domain165-26746.24e-12

PAS1PAS fold154-26338.01.2e-09

PAS_31PAS fold176-25736.54.1e-09

PAS_81PAS domain153-19930.23e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_037726947.1 GGDEF domain-containing protein [Streptomyces scabiei] >gb 34890.0e+00
WP_059082505.1 GGDEF domain-containing protein [Streptomyces scabiei] >dbj 34870.0e+00
WP_060881129.1 GGDEF domain-containing protein [Streptomyces scabiei] 34760.0e+00
WP_046917176.1 GGDEF domain-containing protein [Streptomyces stelliscabiei]... 34300.0e+00
WP_005484356.1 GGDEF domain-containing protein [Streptomyces bottropensis] ... 34160.0e+00
WP_046707159.1 GGDEF domain-containing protein [Streptomyces europaeiscabie... 33970.0e+00
WP_037698857.1 GGDEF domain-containing protein [Streptomyces scabiei] >gb 33970.0e+00
WP_086751323.1 GGDEF domain-containing protein [Streptomyces scabiei] 33700.0e+00
WP_086762085.1 GGDEF domain-containing protein [Streptomyces scabiei] 33640.0e+00
WP_009310302.1 GGDEF domain-containing protein [Streptomyces ipomoeae] >gb 33540.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear