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IDSCAB13001 TypeCDS
From8688834 nt length903
To8689736 aa length300
GenehopE pI6.41
Definitionsqualene/phytoene synthase M.W (Da)32302
Note AseI frg.G
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1654 squalene/phytoene synthase4692.0e-133
coelSCO6759 putative phytoene synthase4553.0e-129
sgrSGR_966 putative squalene/phytoene synthase4122.0e-116
saceSACE_4331 squalene/phytoene synthase1932.0e-50

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SQS_PSY1Squalene/phytoene synthase19-286214.61.5e-63

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_037725436.1 squalene synthase HpnC [Streptomyces scabiei] >gb 9432.2e-126
WP_060877953.1 squalene synthase HpnC [Streptomyces scabiei] 9399.0e-126
WP_059080100.1 squalene synthase HpnC [Streptomyces scabiei] >dbj 9268.8e-124
WP_086753500.1 squalene synthase HpnC [Streptomyces scabiei] 8782.0e-116
WP_033529579.1 squalene synthase HpnC [Streptomyces galbus] 8601.0e-113
WP_037704109.1 squalene synthase HpnC [Streptomyces scabiei] >gb 8591.2e-113
WP_086746901.1 squalene synthase HpnC [Streptomyces scabiei] 8521.5e-112
WP_046706037.1 squalene synthase HpnC [Streptomyces europaeiscabiei] 8479.1e-112
WP_005484610.1 squalene synthase HpnC [Streptomyces bottropensis] >gb 8461.2e-111
WP_045556818.1 MULTISPECIES: squalene synthase HpnC [Streptomyces] >emb 8417.4e-111

PSORT result

LocalizationCertaintyPSORT said
Not Clear