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IDSCAB16491 TypeCDS
From8294055 nt length3897
To8297951 aa length1298
Gene pI6.61
Definitionputative WD-repeat containing protein M.W (Da)138436
Note AseI frg.P/B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4432 putative beta transducin-like protein1293.0e-30
coelSCO3869 putative WD-40 repeat protein5799.0e-166
sgrSGR_3398 putative WD-repeat containing protein5113.0e-145

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

WD4012WD domain, G-beta repeat681-710, 806-840, 849-882, 888-924, 930-966, 980-1005, 1013-1047, 1054-1089, 1094-1131, 1139-1173, 1182-1215, 1224-1257367.41.4e-113

HTH_311Helix-turn-helix domain28-8550.71.6e-13

HTH_31Helix-turn-helix30-7841.59.2e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_060906004.1 DNA-binding protein [Streptomyces scabiei] 57700.0e+00
WP_037722711.1 DNA-binding protein [Streptomyces scabiei] >gb 57550.0e+00
WP_059082198.1 DNA-binding protein [Streptomyces scabiei] >dbj 56340.0e+00
WP_060890324.1 DNA-binding protein [Streptomyces europaeiscabiei] 51330.0e+00
WP_046706065.1 DNA-binding protein [Streptomyces europaeiscabiei] 51310.0e+00
WP_037704273.1 DNA-binding protein [Streptomyces scabiei] >gb 51190.0e+00
WP_055716815.1 DNA-binding protein [Streptomyces torulosus] 49300.0e+00
WP_055521722.1 DNA-binding protein [Streptomyces ossamyceticus] 48870.0e+00
WP_005482560.1 hypothetical protein [Streptomyces bottropensis] >gb 48810.0e+00
WP_046917363.1 DNA-binding protein [Streptomyces stelliscabiei] >gb 48720.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear