-- | --

IDSCAB17071 TypeCDS
From8220748 nt length993
To8219756 aa length330
Gene pI8.03
Definitionputative DNA-binding protein M.W (Da)36128
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1860 putative DNA-binding protein4192.0e-118
coelSCO6539 hypothetical protein4109.0e-116
sgrSGR_1133 putative DNA-binding protein3641.0e-101
saceSACE_7094 transcriptional regulator, XRE family2355.0e-63
nfarnfa22820 putative DNA-binding protein2101.0e-55

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain71-13151.39.7e-14

HTH_31Helix-turn-helix74-12746.82e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_037729769.1 XRE family transcriptional regulator [Streptomyces scabiei] ... 11083.4e-151
WP_061334829.1 XRE family transcriptional regulator [Streptomyces scabiei] 11014.1e-150
WP_060906033.1 XRE family transcriptional regulator [Streptomyces scabiei] 10988.7e-150
WP_063817357.1 XRE family transcriptional regulator [Streptomyces scabiei] 10951.5e-149
WP_059082247.1 XRE family transcriptional regulator [Streptomyces scabiei] ... 10929.9e-149
WP_086749880.1 XRE family transcriptional regulator [Streptomyces scabiei] 10544.1e-143
WP_046703037.1 transcriptional regulator [Streptomyces europaeiscabiei] 10466.9e-142
WP_037704352.1 XRE family transcriptional regulator [Streptomyces scabiei] ... 10451.0e-141
WP_060893909.1 transcriptional regulator [Streptomyces europaeiscabiei] 10441.7e-141
WP_060903562.1 transcriptional regulator [Streptomyces europaeiscabiei] 10405.7e-141

PSORT result

LocalizationCertaintyPSORT said
Not Clear