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IDSCAB19951 TypeCDS
From7887206 nt length1647
To7885560 aa length548
Genesig pI10.15
Definitionputative RNA polymerase sigma factor M.W (Da)58214
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AbfB1Alpha-L-arabinofuranosidase B (ABFB) domain410-542142.95.5e-42

Sigma70_r21Sigma-70 region 229-9553.61.3e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_060881245.1 hypothetical protein [Streptomyces scabiei] 20580.0e+00
WP_052771548.1 sigma-70 family RNA polymerase sigma factor, partial [Strept... 12652.9e-170
KFG08978.1 hypothetical protein IQ61_10840, partial [Streptomyces scabiei] 12613.0e-170
WP_059083581.1 hypothetical protein [Streptomyces scabiei] >dbj 12391.4e-163
WP_053754811.1 hypothetical protein [Streptomyces sp. MMG1533] 11189.7e-146
WP_078067716.1 hypothetical protein [Streptomyces jeddahensis] >gb 11161.7e-145
WP_067033807.1 hypothetical protein [Streptomyces sp. RV15] >gb 11143.6e-145
WP_057582897.1 hypothetical protein [Streptomyces sp. Root264] >gb 11121.1e-144
WP_079309208.1 hypothetical protein [Streptomyces sp. GKU 895] >gb 11101.6e-144
WP_055713907.1 hypothetical protein [Streptomyces torulosus] 10996.8e-143

PSORT result

LocalizationCertaintyPSORT said
Not Clear