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IDSCAB20421 TypeCDS
From7837707 nt length885
To7836823 aa length294
Gene pI7.98
Definitionputative DNA-binding protein M.W (Da)33251
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2175 putative DNA-binding protein5291.0e-151
coelSCO7579 putative DNA binding protein5262.0e-150

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain21-8156.32.7e-15

HTH_31Helix-turn-helix25-7530.03.6e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
GAQ61962.1 helix-turn-helix protein [Streptomyces scabiei] 15030.0e+00
WP_037724550.1 XRE family transcriptional regulator [Streptomyces scabiei] ... 15000.0e+00
EMF53462.1 DNA-binding protein [Streptomyces bottropensis ATCC 25435] 14940.0e+00
WP_059079832.1 XRE family transcriptional regulator [Streptomyces scabiei] 14930.0e+00
WP_046919781.1 XRE family transcriptional regulator [Streptomyces stellisca... 14880.0e+00
WP_046706437.1 XRE family transcriptional regulator [Streptomyces europaeis... 14800.0e+00
WP_028796586.1 XRE family transcriptional regulator [Streptomyces bottropen... 14740.0e+00
WP_033529463.1 XRE family transcriptional regulator [Streptomyces galbus] 14730.0e+00
WP_037700454.1 XRE family transcriptional regulator [Streptomyces scabiei] ... 14730.0e+00
WP_086747807.1 XRE family transcriptional regulator [Streptomyces scabiei] 14720.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear