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IDSCAB20891 TypeCDS
From7785173 nt length1194
To7783980 aa length397
Genernd pI6.02
Definitionputative ribonuclease D M.W (Da)42796
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2231 putative ribonuclease D6460.0e+00
coelSCO6028 hypothetical protein6450.0e+00
sgrSGR_1476 putative ribonuclease D5471.0e-156
saceSACE_1832 putative ribonuclease D (partial match)3618.0e-101
nfarnfa37400 putative RNase D3802.0e-106

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_pol_A_exo113'-5' exonuclease11-175121.04e-35

HRDC1HRDC domain217-28348.94.4e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
GAQ61857.1 ribonuclease D [Streptomyces scabiei] 17830.0e+00
WP_037724430.1 ribonuclease D [Streptomyces scabiei] >gb 17760.0e+00
WP_005481877.1 ribonuclease D [Streptomyces bottropensis] >gb 17530.0e+00
WP_046917662.1 ribonuclease D [Streptomyces stelliscabiei] >gb 17420.0e+00
WP_037701063.1 ribonuclease D [Streptomyces scabiei] >gb 17140.0e+00
WP_033529425.1 ribonuclease D [Streptomyces galbus] 17100.0e+00
WP_086801175.1 ribonuclease D [Streptomyces scabiei] 17080.0e+00
WP_046706556.1 ribonuclease D [Streptomyces europaeiscabiei] 17060.0e+00
SFM90891.1 ribonuclease D [Streptomyces sp. cf124] 17050.0e+00
WP_045559960.1 MULTISPECIES: ribonuclease D [Streptomyces] 17050.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear