-- | --

IDSCAB25321 TypeCDS
From7265579 nt length915
To7266493 aa length304
GenetruB pI7.67
Definitionputative tRNA pseudouridine synthase M.W (Da)32567
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2548 putative tRNA pseudouridine synthase5384.0e-154
coelSCO5709 probable tRNA pseudouridine synthase5315.0e-152
sgrSGR_1808 putative tRNA pseudouridine synthase5016.0e-143
saceSACE_5919 hypothetical protein3015.0e-83
nfarnfa40530 putative tRNA pseudouridine synthase2479.0e-67

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

TruB_N1TruB family pseudouridylate synthase (N terminal domain)34-190158.61.2e-46

TruB_C1tRNA Pseudouridine synthase II, C terminal246-30363.88e-18

TruB_C_21tRNA pseudouridylate synthase B C-terminal domain191-23448.85.2e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_060906244.1 tRNA pseudouridine(55) synthase TruB [Streptomyces scabiei] 15080.0e+00
WP_059082529.1 tRNA pseudouridine(55) synthase TruB [Streptomyces scabiei] ... 15010.0e+00
WP_046913122.1 tRNA pseudouridine(55) synthase TruB [Streptomyces stellisca... 14680.0e+00
WP_005479663.1 tRNA pseudouridine(55) synthase TruB [Streptomyces bottropen... 14670.0e+00
WP_045561381.1 MULTISPECIES: tRNA pseudouridine(55) synthase TruB [Streptom... 14330.0e+00
WP_086749042.1 tRNA pseudouridine(55) synthase TruB [Streptomyces scabiei] 14310.0e+00
WP_037696215.1 MULTISPECIES: tRNA pseudouridine(55) synthase TruB [Streptom... 14310.0e+00
WP_060903677.1 tRNA pseudouridine(55) synthase TruB [Streptomyces europaeis... 14270.0e+00
WP_060890582.1 tRNA pseudouridine(55) synthase TruB [Streptomyces europaeis... 14270.0e+00
WP_033529290.1 tRNA pseudouridine(55) synthase TruB [Streptomyces galbus] 14170.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear