ID	SCAB26051	Type	CDS
From	7178805	nt length	777
To	7179581	aa length	258
Gene	whiG	pI	4.99
Definition	putative RNA polymerase sigma factor	M.W (Da)	28856
Note		AseI frg.	B
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4	1	Sigma-70, region 4	202-251	67.9	3.5e-19
	Sigma70_r2	1	Sigma-70 region 2	28-100	57.5	7.9e-16
	Sigma70_r4_2	1	Sigma-70, region 4	199-239	38.7	5.1e-10
	Sigma70_r3	1	Sigma-70 region 3	108-188	35.0	1e-08

BLAST search result (top 10 hits)

ID	Description	Score	E-value
EMF54010.1	whiG protein [Streptomyces bottropensis ATCC 25435]	1247	5.3e-174
WP_037724696.1	RNA polymerase sigma factor WhiG [Streptomyces scabiei] >gb	1247	9.5e-174
WP_020114085.1	MULTISPECIES: RNA polymerase sigma factor WhiG [Streptomyces...	1244	3.1e-173
WP_037696035.1	RNA polymerase sigma factor WhiG [Streptomyces scabiei] >gb	1238	2.4e-172
WP_046704976.1	RNA polymerase sigma factor WhiG [Streptomyces europaeiscabi...	1233	1.3e-171
WP_033526936.1	RNA polymerase sigma factor WhiG [Streptomyces galbus]	1231	2.6e-171
WP_055517160.1	RNA polymerase sigma factor WhiG [Streptomyces ossamyceticus...	1231	3.0e-171
WP_009344318.1	RNA polymerase sigma factor WhiG [Streptomyces ipomoeae] >gb...	1230	3.9e-171
WP_086754953.1	RNA polymerase sigma factor WhiG [Streptomyces scabiei]	1229	5.0e-171
WP_045561450.1	MULTISPECIES: RNA polymerase sigma factor WhiG [Streptomyces...	1227	1.0e-170

PSORT result

Localization	Certainty	PSORT said
Not Clear

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