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IDSCAB26231 TypeCDS
From7162482 nt length1551
To7164032 aa length516
Geneffh pI9.54
Definitionputative signal recognition particle, subunit SRP54 M.W (Da)55409
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2648 putative signal recognition particle, subunit SRP548960.0e+00
coelSCO5586 signal recognition particle protein8830.0e+00
sgrSGR_1892 putative signal recognition particle8610.0e+00
saceSACE_6057 signal recognition particle GTPase6560.0e+00
nfarnfa41600 putative signal recognition particle protein6171.0e-177

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SRP541SRP54-type protein, GTPase domain100-297234.76e-70

SRP_SPB1Signal peptide binding domain333-430105.81.3e-30

SRP54_N1SRP54-type protein, helical bundle domain5-8275.52.7e-21

CbiA1CobQ/CobB/MinD/ParA nucleotide binding domain110-34127.23e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_060881409.1 signal recognition particle protein [Streptomyces scabiei] 23150.0e+00
WP_059082598.1 signal recognition particle protein [Streptomyces scabiei] >... 23100.0e+00
WP_045561461.1 MULTISPECIES: signal recognition particle protein [Streptomy... 23010.0e+00
WP_086798420.1 signal recognition particle protein [Streptomyces scabiei] 22990.0e+00
WP_060890619.1 signal recognition particle protein [Streptomyces europaeisc... 22970.0e+00
WP_046705180.1 signal recognition particle protein [Streptomyces europaeisc... 22970.0e+00
WP_060906282.1 signal recognition particle protein [Streptomyces scabiei] 22930.0e+00
WP_005479823.1 MULTISPECIES: signal recognition particle protein [Streptomy... 22900.0e+00
WP_037696007.1 signal recognition particle protein [Streptomyces scabiei] >... 22850.0e+00
WP_033526921.1 signal recognition particle protein [Streptomyces galbus] 22840.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear