-- | --

IDSCAB26331 TypeCDS
From7147146 nt length3624
To7150769 aa length1207
Genesmc pI5.17
Definitionputative chromosome segregation protein M.W (Da)131598
Note AseI frg.B
SignalP v.4.0Signal peptide | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2658 putative chromosome segregation protein18160.0e+00
coelSCO5577 putative chromosome associated protein17610.0e+00
sgrSGR_1901 putative chromosome segregation protein16700.0e+00
saceSACE_6071 chromosome segregation ATPase10750.0e+00
nfarnfa41670 putative chromosome segregation protein9970.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SMC_N1RecF/RecN/SMC N terminal domain3-1199241.08.5e-72

SMC_hinge1SMC proteins Flexible Hinge Domain512-64585.33.2e-24

AAA_212AAA domain, putative AbiEii toxin, Type IV TA system26-83, 1113-117864.01.7e-17

AAA_231AAA domain6-24854.02.8e-14

AAA_151AAA ATPase domain1-4949.06.2e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_037724709.1 chromosome segregation protein SMC [Streptomyces scabiei] >g... 24740.0e+00
WP_059082605.1 chromosome segregation protein SMC [Streptomyces scabiei] >d... 24560.0e+00
WP_086758983.1 chromosome segregation protein SMC [Streptomyces scabiei] 22830.0e+00
WP_046704866.1 chromosome segregation protein SMC [Streptomyces europaeisca... 22350.0e+00
WP_037695981.1 chromosome segregation protein SMC [Streptomyces scabiei] >g... 22300.0e+00
WP_060890623.1 chromosome segregation protein SMC, partial [Streptomyces eu... 22290.0e+00
WP_046917004.1 chromosome segregation protein SMC [Streptomyces stelliscabi... 22190.0e+00
WP_005479840.1 chromosome segregation protein SMC [Streptomyces bottropensi... 22100.0e+00
WP_086748229.1 chromosome segregation protein SMC [Streptomyces scabiei] 21620.0e+00
WP_055712659.1 chromosome segregation protein SMC [Streptomyces torulosus] 21610.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear