-- | --

IDSCAB30971 TypeCDS
From6633514 nt length2598
To6630917 aa length865
GenerhlE pI9.86
Definitionputative ATP-dependent RNA helicase M.W (Da)91944
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3098 putative ATP-dependent RNA helicase8710.0e+00
sgrSGR_2359 putative ATP-dependent RNA helicase7650.0e+00
saceSACE_1060 putative ATP-dependent RNA helicase5425.0e-155
nfarnfa45730 putative ATP-dependent RNA helicase5311.0e-151

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DEAD1DEAD/DEAH box helicase54-227169.84.2e-50

Helicase_C1Helicase conserved C-terminal domain270-379102.12e-29

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
KFG04715.1 DEAD/DEAH box helicase [Streptomyces scabiei] 22660.0e+00
WP_078853605.1 DEAD/DEAH box helicase [Streptomyces sp. FxanaA7] 21310.0e+00
WP_086803298.1 DEAD/DEAH box helicase [Streptomyces scabiei] 21080.0e+00
WP_093793017.1 DEAD/DEAH box helicase [Streptomyces sp. cf124] 20970.0e+00
SFO14457.1 Superfamily II DNA and RNA helicase [Streptomyces sp. cf124] 20970.0e+00
WP_009303638.1 ATP-dependent RNA helicase DeaD family protein [Streptomyces... 20640.0e+00
WP_063791471.1 ATP-dependent helicase, partial [Streptomyces torulosus] 20630.0e+00
WP_055514454.1 ATP-dependent helicase [Streptomyces ossamyceticus] 20490.0e+00
WP_052295926.1 DEAD/DEAH box helicase [Streptomyces avermitilis] >gb 20440.0e+00
WP_085210032.1 DEAD/DEAH box helicase [Streptomyces sp. Amel2xC10] >emb 20400.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear