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IDSCAB33481 TypeCDS
From6369692 nt length1227
To6368466 aa length408
GenexseA pI6.74
Definitionputative exoribonuclease large subunit M.W (Da)44437
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3211 putative exoribonuclease large subunit7070.0e+00
coelSCO5056 putative exoribonuclease large subunit6890.0e+00
sgrSGR_2474 putative exoribonuclease large subunit6630.0e+00
saceSACE_0937 putative exodeoxyribonuclease VII large subunit4211.0e-118
nfarnfa47970 putative exodeoxyribonuclease VII large subunit3992.0e-112

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Exonuc_VII_L2Exonuclease VII, large subunit129-348, 336-396234.61.7e-69

tRNA_anti_21OB-fold nucleic acid binding domain12-10558.93.8e-16

tRNA_anti-codon1OB-fold nucleic acid binding domain30-10733.72.4e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_060906423.1 exodeoxyribonuclease VII large subunit [Streptomyces scabiei... 19980.0e+00
WP_059084461.1 exodeoxyribonuclease VII large subunit [Streptomyces scabiei... 19480.0e+00
WP_086758782.1 exodeoxyribonuclease VII large subunit [Streptomyces scabiei... 19190.0e+00
WP_086750155.1 exodeoxyribonuclease VII large subunit [Streptomyces scabiei... 19130.0e+00
WP_060890802.1 exodeoxyribonuclease VII large subunit [Streptomyces europae... 19110.0e+00
WP_037694799.1 exodeoxyribonuclease VII large subunit [Streptomyces scabiei... 19100.0e+00
WP_046707488.1 exodeoxyribonuclease VII large subunit [Streptomyces europae... 19090.0e+00
WP_005480697.1 exodeoxyribonuclease VII large subunit [Streptomyces bottrop... 19040.0e+00
WP_046919004.1 exodeoxyribonuclease VII large subunit [Streptomyces stellis... 19020.0e+00
WP_033529357.1 exodeoxyribonuclease VII large subunit [Streptomyces galbus] 18930.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear