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IDSCAB34321 TypeCDS
From6273493 nt length501
To6272993 aa length166
GenegreA pI4.37
Definitionputative transcription elongation factor M.W (Da)17868
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3301 putative transcription elongation factor3121.0e-86
coelSCO4965 putative transcription elongation factor2983.0e-82
sgrSGR_2564 putative transcription elongation factor2851.0e-78
saceSACE_0907 transcription elongation factor G1677.0e-43
nfarnfa48260 putative transcription elongation factor1806.0e-47

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GreA_GreB_N1Transcription elongation factor, N-terminal10-7987.54.2e-25

GreA_GreB1Transcription elongation factor, GreA/GreB, C-term87-16049.23.4e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_037694600.1 transcription elongation factor GreA [Streptomyces scabiei] ... 7781.6e-105
WP_045563166.1 MULTISPECIES: transcription elongation factor GreA [Streptom... 7772.2e-105
WP_005480857.1 MULTISPECIES: transcription elongation factor GreA [Streptom... 7762.9e-105
WP_033528003.1 MULTISPECIES: transcription elongation factor GreA [Streptom... 7739.3e-105
WP_046704367.1 transcription elongation factor GreA [Streptomyces europaeis... 7721.3e-104
WP_086752671.1 transcription elongation factor GreA [Streptomyces scabiei] 7711.5e-104
WP_086753105.1 transcription elongation factor GreA [Streptomyces scabiei] 7581.5e-102
WP_055538988.1 transcription elongation factor GreA [Streptomyces neyagawae... 7486.1e-101
WP_009329780.1 transcription elongation factor GreA [Streptomyces ipomoeae]... 7461.1e-100
WP_055713106.1 transcription elongation factor GreA [Streptomyces torulosus... 7416.3e-100

PSORT result

LocalizationCertaintyPSORT said
Not Clear