-- | --

IDSCAB36251 TypeCDS
From6046451 nt length903
To6047353 aa length300
Gene pI7.42
Definitionputative LysR-family transcriptional regulator M.W (Da)31255
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4996 putative LysR-family transcriptional regulator5009.0e-143
coelSCO4766 putative transcriptional regulator4861.0e-138
sgrSGR_2761 putative LysR-family transcriptional regulator4654.0e-132
saceSACE_0348 probable transcriptional regulator, LysR family2684.0e-73

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain89-296147.13.9e-43

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family5-6378.13.3e-22

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_059079116.1 LysR family transcriptional regulator [Streptomyces scabiei] 11463.3e-157
GAQ60942.1 HTH-type transcriptional regulator GltC [Streptomyces scabiei] 11421.3e-156
WP_046915026.1 LysR family transcriptional regulator [Streptomyces stellisc... 11342.3e-155
WP_028796468.1 LysR family transcriptional regulator [Streptomyces bottrope... 11308.5e-155
EMF54840.1 LysR family transcriptional regulator [Streptomyces bottropensis ... 11246.8e-154
WP_009321240.1 LysR family transcriptional regulator [Streptomyces ipomoeae... 11212.1e-153
WP_055712453.1 LysR family transcriptional regulator [Streptomyces torulosu... 11169.9e-153
WP_037696452.1 LysR family transcriptional regulator [Streptomyces scabiei]... 11141.9e-152
WP_046704807.1 LysR family transcriptional regulator [Streptomyces europaei... 11124.9e-152
WP_055516083.1 LysR family transcriptional regulator [Streptomyces ossamyce... 11116.5e-152

PSORT result

LocalizationCertaintyPSORT said
Not Clear