ID	SCAB39411	Type	CDS
From	5719047	nt length	552
To	5718496	aa length	183
Gene	sig	pI	5.44
Definition	putative RNA polymerase sigma factor	M.W (Da)	21064
Note		AseI frg.
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4_2	1	Sigma-70, region 4	104-155	61.0	5.6e-17
	Sigma70_r4	1	Sigma-70, region 4	109-157	51.7	4.1e-14
	Sigma70_r2	1	Sigma-70 region 2	16-78	30.5	2.1e-07
	Sigma70_ECF	1	ECF sigma factor	94-160	21.9	0.00012

BLAST search result (top 10 hits)

ID	Description	Score	E-value
EMF57138.1	sigE protein [Streptomyces bottropensis ATCC 25435]	782	1.3e-105
WP_020113781.1	SigE family RNA polymerase sigma factor [Streptomyces bottro...	782	1.5e-105
WP_086756493.1	SigE family RNA polymerase sigma factor [Streptomyces scabie...	775	1.6e-104
WP_009312740.1	SigE family RNA polymerase sigma factor [Streptomyces ipomoe...	768	1.6e-103
WP_055697761.1	MULTISPECIES: SigE family RNA polymerase sigma factor [Strep...	765	4.9e-103
WP_055567865.1	SigE family RNA polymerase sigma factor [Streptomyces atriru...	762	1.4e-102
WP_045562650.1	MULTISPECIES: SigE family RNA polymerase sigma factor [Strep...	762	1.7e-102
WP_062771649.1	MULTISPECIES: SigE family RNA polymerase sigma factor [Strep...	761	2.1e-102
WP_055552579.1	SigE family RNA polymerase sigma factor [Streptomyces kanamy...	760	2.2e-102
WP_046709766.1	SigE family RNA polymerase sigma factor [Streptomyces europa...	760	3.3e-102

PSORT result

Localization	Certainty	PSORT said
Not Clear

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