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IDSCAB40871 TypeCDS
From5538332 nt length2475
To5535858 aa length824
Gene pI6.7
Definitionputative ATP-dependent RNA helicase M.W (Da)88850
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4613 putative ATP-dependent RNA helicase14940.0e+00
coelSCO3550 putative helicase14770.0e+00
sgrSGR_3308 putative ATP-dependent RNA helicase13650.0e+00
saceSACE_0373 DEAD/DEAH box helicase-like8300.0e+00
nfarnfa3650 putative ATP-dependent RNA helicase8010.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DEAD1DEAD/DEAH box helicase102-27791.73.9e-26

DUF19981Domain of unknown function (DUF1998)707-78671.09.7e-20

Helicase_C1Helicase conserved C-terminal domain336-44649.54.2e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_079081812.1 DEAD/DEAH box helicase [Streptomyces scabiei] >dbj 38070.0e+00
WP_086022874.1 DEAD/DEAH box helicase [Streptomyces scabiei] 37690.0e+00
WP_078907607.1 DEAD/DEAH box helicase [Streptomyces stelliscabiei] 37500.0e+00
WP_079024381.1 DEAD/DEAH box helicase [Streptomyces scabiei] >gb 37310.0e+00
WP_078935622.1 DEAD/DEAH box helicase [Streptomyces europaeiscabiei] 37200.0e+00
WP_079104342.1 DEAD/DEAH box helicase [Streptomyces europaeiscabiei] 37150.0e+00
WP_078936888.1 DEAD/DEAH box helicase [Streptomyces galbus] 37070.0e+00
WP_078853956.1 DEAD/DEAH box helicase [Streptomyces sp. FxanaA7] 37040.0e+00
WP_079158199.1 DEAD/DEAH box helicase [Streptomyces sp. 96-12] 37030.0e+00
SFN59157.1 DEAD/DEAH box helicase domain-containing protein [Streptomyces s... 37000.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear