ID	SCAB41621	Type	CDS
From	5456721	nt length	585
To	5457305	aa length	194
Gene	sig	pI	9.89
Definition	putative RNA polymerase sigma factor	M.W (Da)	21372
Note		AseI frg.	C
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4_2	1	Sigma-70, region 4	134-186	45.7	3.4e-12
	Sigma70_r2	1	Sigma-70 region 2	42-106	44.8	7.3e-12
	Sigma70_r4	1	Sigma-70, region 4	139-187	41.9	4.8e-11

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_078580151.1	SigE family RNA polymerase sigma factor [Streptomyces scabie...	877	2.4e-119
WP_079082086.1	SigE family RNA polymerase sigma factor [Streptomyces scabie...	876	3.8e-119
GAQ67715.1	RNA polymerase sigma-E factor [Streptomyces scabiei]	873	3.9e-119
EMF53127.1	sigma factor [Streptomyces bottropensis ATCC 25435]	867	2.9e-118
WP_078531555.1	SigE family RNA polymerase sigma factor [Streptomyces bottro...	870	3.7e-118
KND46590.1	RNA polymerase subunit sigma-24 [Streptomyces stelliscabiei]	866	4.2e-118
WP_078907053.1	SigE family RNA polymerase sigma factor [Streptomyces stelli...	869	5.1e-118
KFF96810.1	RNA polymerase subunit sigma-24 [Streptomyces scabiei]	861	3.0e-117
WP_078935469.1	MULTISPECIES: SigE family RNA polymerase sigma factor [Strep...	862	6.3e-117
WP_086753769.1	SigE family RNA polymerase sigma factor [Streptomyces scabie...	858	2.2e-116

PSORT result

Localization	Certainty	PSORT said
Not Clear

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