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IDSCAB42291 TypeCDS
From5381288 nt length2616
To5383903 aa length871
GeneclpB pI4.72
Definitionputative ATP-dependent Clp protease M.W (Da)95236
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4514 putative ATP-dependent Clp protease14370.0e+00
coelSCO3661 clpB putative ATP-dependent protease ATP-binding subunit15110.0e+00
sgrSGR_3426 putative ATP-dependent protease subunit14590.0e+00
saceSACE_7199 putative Clp protease ATP-binding subunit11490.0e+00
nfarnfa54020 putative Clp protease ATP-binding subunit11230.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AAA_21AAA domain (Cdc48 subfamily)602-763188.21.1e-55

ClpB_D2-small1C-terminal, D2-small domain, of ClpB protein770-85097.63e-28

AAA2ATPase family associated with various cellular activities (AAA)204-338, 608-72882.14.2e-23

Clp_N2Clp amino terminal domain, pathogenicity island component18-68, 95-14667.38.5e-19

AAA_51AAA domain (dynein-related subfamily)607-72664.87e-18

Sigma54_activat1Sigma-54 interaction domain605-70737.51.7e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_060906632.1 ATP-dependent chaperone ClpB [Streptomyces scabiei] 39150.0e+00
WP_037727386.1 ATP-dependent chaperone ClpB [Streptomyces scabiei] >gb 39150.0e+00
WP_059084106.1 ATP-dependent chaperone ClpB [Streptomyces scabiei] >dbj 38850.0e+00
WP_005483702.1 ATP-dependent chaperone ClpB [Streptomyces bottropensis] >gb... 38580.0e+00
WP_046916970.1 ATP-dependent chaperone ClpB [Streptomyces stelliscabiei] >g... 38510.0e+00
SFN93757.1 ATP-dependent Clp protease ATP-binding subunit ClpB [Streptomyce... 38190.0e+00
WP_052145754.1 ATP-dependent chaperone ClpB [Streptomyces galbus] 37950.0e+00
WP_055515368.1 ATP-dependent chaperone ClpB [Streptomyces ossamyceticus] 36790.0e+00
WP_055714824.1 ATP-dependent chaperone ClpB [Streptomyces torulosus] 36720.0e+00
WP_009309415.1 ATP-dependent chaperone ClpB [Streptomyces ipomoeae] >gb 36210.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear