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IDSCAB43471 TypeCDS
From5266529 nt length204
To5266326 aa length67
GenecspD pI4.56
Definitionputative cold shock protein M.W (Da)7221
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_893 putative cold shock protein1321.0e-32
coelSCO3748 f40 cold shock protein1266.0e-31
sgrSGR_5495 putative cold shock protein1311.0e-32

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CSD1'Cold-shock' DNA-binding domain3-65105.01.2e-30

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_057577999.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3432.2e-42
WP_003991681.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3432.7e-42
WP_055572861.1 MULTISPECIES: cold-shock protein [Streptomyces] >emb 3422.8e-42
WP_010032345.1 MULTISPECIES: cold-shock protein [Streptomyces] >dbj 3422.8e-42
WP_033201600.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3406.1e-42
WP_030846597.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3406.6e-42
WP_015031667.1 MULTISPECIES: cold-shock protein [Streptomyces] >emb 3407.7e-42
WP_033323720.1 cold-shock protein [Streptomyces yerevanensis] 3398.1e-42
WP_042163016.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3398.4e-42
WP_060903895.1 cold-shock protein [Streptomyces europaeiscabiei] 3391.1e-41

PSORT result

LocalizationCertaintyPSORT said
Not Clear