ID	SCAB44631	Type	CDS
From	5145392	nt length	555
To	5144838	aa length	184
Gene	sig	pI	11.05
Definition	putative RNA polymerase sigma factor	M.W (Da)	20474
Note		AseI frg.	C
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4_2	1	Sigma-70, region 4	110-162	61.4	4.2e-17
	Sigma70_r4	1	Sigma-70, region 4	115-164	52.1	3.2e-14
	Sigma70_r2	1	Sigma-70 region 2	23-82	32.1	6.4e-08
	Sigma70_ECF	1	ECF sigma factor	66-155	26.4	4.8e-06
	GerE	1	Bacterial regulatory proteins, luxR family	118-165	25.1	8.2e-06

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_086752784.1	SigE family RNA polymerase sigma factor, partial [Streptomyc...	658	1.3e-86
WP_046916917.1	SigE family RNA polymerase sigma factor [Streptomyces stelli...	657	1.4e-86
WP_060891104.1	SigE family RNA polymerase sigma factor [Streptomyces europa...	657	2.8e-86
WP_037689905.1	SigE family RNA polymerase sigma factor [Streptomyces scabie...	653	1.0e-85
WP_033530504.1	SigE family RNA polymerase sigma factor [Streptomyces galbus...	650	2.8e-85
WP_060883949.1	MULTISPECIES: SigE family RNA polymerase sigma factor [Strep...	650	3.5e-85
WP_086800531.1	SigE family RNA polymerase sigma factor [Streptomyces scabie...	650	3.5e-85
WP_045558618.1	MULTISPECIES: SigE family RNA polymerase sigma factor [Strep...	648	5.5e-85
WP_020113609.1	SigE family RNA polymerase sigma factor [Streptomyces bottro...	646	6.0e-85
EMF52755.1	sigma factor [Streptomyces bottropensis ATCC 25435]	641	1.0e-83

PSORT result

Localization	Certainty	PSORT said
Not Clear

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