-- | --

IDSCAB46271 TypeCDS
From4961179 nt length378
To4961556 aa length125
Gene pI4.22
Definitionhypothetical protein M.W (Da)13313
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4271 putative membrane protein1991.0e-52
coelSCO3922 putative membrane protein1974.0e-52
sgrSGR_3659 putative membrane protein1834.0e-48
saceSACE_1949 putative membrane protein999.0e-23
nfarnfa51480 putative membrane protein668.0e-13

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Phage_holin_4_21Mycobacterial 4 TMS phage holin, superfamily IV2-115109.01.6e-31

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_059079602.1 phage holin family protein [Streptomyces scabiei] >dbj 5861.3e-77
WP_086747009.1 phage holin family protein [Streptomyces scabiei] 5651.8e-74
WP_046704298.1 phage holin family protein [Streptomyces europaeiscabiei] 5633.6e-74
WP_046913162.1 phage holin family protein [Streptomyces stelliscabiei] >gb 5625.0e-74
WP_037689592.1 phage holin family protein [Streptomyces scabiei] >gb 5619.1e-74
WP_005482915.1 phage holin family protein [Streptomyces bottropensis] >gb 5591.6e-73
WP_086752575.1 phage holin family protein [Streptomyces scabiei] 5549.4e-73
WP_033530684.1 phage holin family protein [Streptomyces galbus] 5531.2e-72
WP_055514546.1 phage holin family protein [Streptomyces ossamyceticus] 5495.8e-72
WP_055537177.1 phage holin family protein [Streptomyces neyagawaensis] 5495.9e-72

PSORT result

LocalizationCertaintyPSORT said
Not Clear