ID	SCAB47281	Type	CDS
From	4843301	nt length	921
To	4844221	aa length	306
Gene	sig	pI	4.49
Definition	putative RNA polymerase sigma factor	M.W (Da)	33622
Note		AseI frg.	O
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4	1	Sigma-70, region 4	252-301	71.7	2.3e-20
	Sigma70_r2	1	Sigma-70 region 2	85-154	64.0	7.1e-18
	Sigma70_r3	1	Sigma-70 region 3	166-224	46.8	2.1e-12
	Sigma70_r4_2	1	Sigma-70, region 4	252-299	38.0	8.8e-10

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_005482774.1	MULTISPECIES: RNA polymerase sigma factor SigF [Streptomyces...	1479	0.0e+00
WP_045562517.1	MULTISPECIES: RNA polymerase sigma factor SigF [Streptomyces...	1459	0.0e+00
WP_086746170.1	RNA polymerase sigma factor SigF [Streptomyces scabiei]	1457	0.0e+00
WP_033526712.1	RNA polymerase sigma factor SigF [Streptomyces galbus]	1457	0.0e+00
WP_046707330.1	RNA polymerase sigma factor SigF [Streptomyces europaeiscabi...	1456	0.0e+00
WP_037689439.1	RNA polymerase sigma factor SigF [Streptomyces scabiei] >gb	1450	0.0e+00
WP_009327338.1	RNA polymerase sigma factor SigF [Streptomyces ipomoeae] >gb...	1445	0.0e+00
WP_055522255.1	MULTISPECIES: RNA polymerase sigma factor SigF [Streptomyces...	1436	0.0e+00
WP_055713414.1	RNA polymerase sigma factor SigF [Streptomyces torulosus]	1431	0.0e+00
WP_086785692.1	RNA polymerase sigma factor SigF, partial [Streptomyces scab...	1382	0.0e+00

PSORT result

Localization	Certainty	PSORT said
Not Clear

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