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IDSCAB47901 TypeCDS
From4780053 nt length207
To4779847 aa length68
Gene pI11.4
Definitionputative MerR-family transcriptional regulator M.W (Da)7545
Note AseI frg.N
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4130 putative MerR-family transcriptional regulator1373.0e-34
coelSCO4091 putative DNA-binding protein1373.0e-34
sgrSGR_3882 putative MerR-family transcriptional regulator1373.0e-34
saceSACE_6926 excisionase/Xis, DNA-binding867.0e-19
nfarnfa51530 putative transcriptional regulator751.0e-15

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_171Helix-turn-helix domain11-5944.98.6e-12

MerR1MerR family regulatory protein13-4933.81.8e-08

MerR_11MerR HTH family regulatory protein14-5729.16.9e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003980577.1 MULTISPECIES: MerR family DNA-binding transcriptional regula... 3423.7e-42
WP_033321412.1 MULTISPECIES: MerR family DNA-binding transcriptional regula... 3415.6e-42
WP_027749187.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 3415.6e-42
WP_062011504.1 helix-turn-helix domain-containing protein [Streptomyces spo... 3406.1e-42
WP_060881689.1 helix-turn-helix domain-containing protein [Streptomyces sca... 3406.1e-42
WP_020869672.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 3406.5e-42
WP_019355084.1 MULTISPECIES: MerR family DNA-binding transcriptional regula... 3407.1e-42
WP_016471853.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 3407.9e-42
WP_086732921.1 helix-turn-helix domain-containing protein [Streptomyces gla... 3398.5e-42
WP_067377109.1 helix-turn-helix domain-containing protein [Streptomyces oli... 3398.6e-42

PSORT result

LocalizationCertaintyPSORT said
Not Clear