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IDSCAB47921 TypeCDS
From4774718 nt length3978
To4778695 aa length1325
GenehrpA pI8.07
Definitionputative ATP-dependent helicase M.W (Da)150080
Note AseI frg.N
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4128 putative ATP-dependent helicase24920.0e+00
coelSCO4092 ATP-dependent helicase24870.0e+00
sgrSGR_3884 putative ATP-dependent helicase22420.0e+00
saceSACE_6203 ATP-dependent helicase16900.0e+00
nfarnfa37970 putative ATP-dependent helicase13710.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF34181Domain of unknown function (DUF3418)726-1321754.76.4e-227

HA21Helicase associated domain (HA2)468-55968.83.7e-19

OB_NTP_bind1Oligonucleotide/oligosaccharide-binding (OB)-fold615-71156.52.3e-15

Helicase_C1Helicase conserved C-terminal domain288-40542.09e-11

AAA_191AAA domain90-21127.92.3e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_060881690.1 ATP-dependent RNA helicase HrpA [Streptomyces scabiei] 65650.0e+00
WP_060878763.1 ATP-dependent RNA helicase HrpA [Streptomyces scabiei] 65580.0e+00
WP_059084306.1 ATP-dependent RNA helicase HrpA [Streptomyces scabiei] >dbj 65180.0e+00
WP_046914980.1 ATP-dependent RNA helicase HrpA [Streptomyces stelliscabiei]... 64970.0e+00
WP_005482652.1 ATP-dependent RNA helicase HrpA [Streptomyces bottropensis] ... 64630.0e+00
WP_046705714.1 ATP-dependent RNA helicase HrpA [Streptomyces europaeiscabie... 64350.0e+00
WP_037689322.1 ATP-dependent RNA helicase HrpA [Streptomyces scabiei] >gb 64320.0e+00
WP_060903927.1 ATP-dependent RNA helicase HrpA [Streptomyces europaeiscabie... 64310.0e+00
WP_086757820.1 ATP-dependent RNA helicase HrpA [Streptomyces scabiei] 64230.0e+00
WP_033526760.1 ATP-dependent RNA helicase HrpA [Streptomyces galbus] 64180.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear