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IDSCAB49101 TypeCDS
From4669347 nt length1842
To4671188 aa length613
Gene pI7.84
Definitionputative membrane protein M.W (Da)63820
Note AseI frg.N
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4117 putative membrane protein4656.0e-132
sgrSGR_3904 conserved hypothetical protein4171.0e-117
saceSACE_6488 hypothetical protein2069.0e-54

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

NPCBM1NPCBM/NEW2 domain504-61090.01.3e-25

Sigma70_r21Sigma-70 region 267-13540.91.1e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
GAQ67807.1 RNA polymerase sigma factor [Streptomyces scabiei] 14690.0e+00
KFG07506.1 ECF subfamily RNA polymerase sigma-24 subunit [Streptomyces scabi... 14220.0e+00
WP_078935323.1 RNA polymerase subunit sigma-24 [Streptomyces europaeiscabie... 13890.0e+00
KND44316.1 ECF subfamily RNA polymerase sigma-24 subunit [Streptomyces stell... 13820.0e+00
WP_078853984.1 RNA polymerase subunit sigma-24 [Streptomyces sp. FxanaA7] 13730.0e+00
WP_093791029.1 RNA polymerase subunit sigma-24 [Streptomyces sp. cf124] >em... 13720.0e+00
WP_079023885.1 RNA polymerase subunit sigma-24 [Streptomyces scabiei] 13670.0e+00
WP_078937251.1 RNA polymerase subunit sigma-24 [Streptomyces galbus] 13642.0e-180
WP_046773881.1 ECF subfamily RNA polymerase sigma-24 subunit, partial [Stre... 12971.8e-173
WP_037726231.1 ECF subfamily RNA polymerase sigma-24 subunit [Streptomyces ... 12825.2e-169

PSORT result

LocalizationCertaintyPSORT said
Not Clear