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IDSCAB49841 TypeCDS
From4589881 nt length471
To4589411 aa length156
Gene pI4.63
Definitionputative DNA-binding protein M.W (Da)16987
Note AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4012 putative DNA-binding protein2412.0e-65
coelSCO4198 putative DNA-binding protein2292.0e-61
sgrSGR_3987 putative DNA-binding protein1861.0e-48
saceSACE_6990 transcriptional regulator, XRE family1476.0e-37
nfarnfa52090 putative DNA-binding protein1375.0e-34

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_31Helix-turn-helix13-6555.15.2e-15

HTH_311Helix-turn-helix domain9-6453.91.5e-14

HTH_191Helix-turn-helix domain10-6943.71.9e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_059080310.1 XRE family transcriptional regulator [Streptomyces scabiei] ... 6484.1e-86
WP_046917686.1 XRE family transcriptional regulator [Streptomyces stellisca... 6208.2e-82
WP_046707055.1 XRE family transcriptional regulator [Streptomyces europaeis... 6154.2e-81
WP_037688399.1 XRE family transcriptional regulator [Streptomyces scabiei] ... 6137.1e-81
WP_086747164.1 XRE family transcriptional regulator [Streptomyces scabiei] 6138.4e-81
WP_005476838.1 XRE family transcriptional regulator [Streptomyces bottropen... 6102.7e-80
WP_086762871.1 XRE family transcriptional regulator [Streptomyces scabiei] 6102.8e-80
WP_075026968.1 helix-turn-helix domain-containing protein [Streptomyces mir... 6106.2e-80
WP_067371565.1 helix-turn-helix domain-containing protein [Streptomyces oli... 6098.2e-80
WP_060894463.1 XRE family transcriptional regulator [Streptomyces diastatoc... 6089.1e-80

PSORT result

LocalizationCertaintyPSORT said
Not Clear