ID	SCAB51001	Type	CDS
From	4474600	nt length	573
To	4474028	aa length	190
Gene		pI	6.98
Definition	putative 2'-5' RNA ligase	M.W (Da)	20694
Note		AseI frg.	D
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	LigT_PEase	2	LigT like Phosphoesterase	9-90, 98-167	82.6	1.5e-23
	2_5_RNA_ligase2	1	2'-5' RNA ligase superfamily	36-164	51.6	8.5e-14

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_037722810.1	RNA 2',3'-cyclic phosphodiesterase [Streptomyces scabiei] >g...	714	4.4e-95
WP_059080467.1	RNA 2',3'-cyclic phosphodiesterase [Streptomyces scabiei]	677	1.8e-89
GAQ62627.1	2'-5'-RNA ligase [Streptomyces scabiei]	674	6.6e-89
WP_046917886.1	RNA 2',3'-cyclic phosphodiesterase [Streptomyces stelliscabi...	646	1.2e-84
WP_086749954.1	RNA 2',3'-cyclic phosphodiesterase [Streptomyces scabiei]	636	3.4e-83
WP_028797071.1	RNA 2',3'-cyclic phosphodiesterase [Streptomyces bottropensi...	636	4.1e-83
EMF51113.1	tRNA ligase [Streptomyces bottropensis ATCC 25435]	634	1.1e-82
WP_037705662.1	RNA 2',3'-cyclic phosphodiesterase [Streptomyces scabiei] >g...	632	1.5e-82
WP_046709314.1	RNA 2',3'-cyclic phosphodiesterase [Streptomyces europaeisca...	625	1.6e-81
WP_055711664.1	RNA 2',3'-cyclic phosphodiesterase [Streptomyces torulosus]	566	1.7e-72

PSORT result

Localization	Certainty	PSORT said
Not Clear

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