ID	SCAB52551	Type	CDS
From	4307716	nt length	645
To	4307072	aa length	214
Gene	sig	pI	10.69
Definition	putative RNA polymerase sigma factor	M.W (Da)	24024
Note		AseI frg.	D
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4_2	1	Sigma-70, region 4	125-176	59.4	1.8e-16
	Sigma70_r2	1	Sigma-70 region 2	20-88	52.3	3.2e-14
	Sigma70_r4	1	Sigma-70, region 4	129-178	46.7	1.5e-12

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_037702641.1	RNA polymerase sigma factor [Streptomyces scabiei]	782	1.5e-104
WP_086746438.1	RNA polymerase sigma factor [Streptomyces scabiei]	778	5.4e-104
WP_007382698.1	RNA polymerase sigma factor [Streptomyces sviceus] >gb	777	8.2e-104
WP_037941591.1	MULTISPECIES: RNA polymerase sigma factor [Streptomyces] >gb...	774	2.0e-103
WP_086757105.1	RNA polymerase sigma factor [Streptomyces scabiei]	764	8.2e-102
KFF96796.1	RNA polymerase sigma factor [Streptomyces scabiei] >dbj	760	2.5e-101
KFG07880.1	RNA polymerase sigma factor [Streptomyces scabiei]	759	3.6e-101
WP_067244096.1	RNA polymerase sigma factor [Streptomyces sp. DSM 15324] >gb...	759	4.3e-101
WP_059206754.1	RNA polymerase sigma factor [Streptomyces canus] >gb	759	4.4e-101
WP_037820249.1	RNA polymerase sigma factor [Streptomyces sp. NRRL B-3229]	756	1.1e-100

PSORT result

Localization	Certainty	PSORT said
Not Clear

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