SCAB53871

ID SCAB53871 Type CDS
From 4171105 nt length 915
To 4170191 aa length 304
Gene cmek pI 4.43
Definition putative 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase M.W (Da) 30508
Note AseI frg. D
SignalP v.4.0 Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*	Reciprocally best hit to	Score	E-value
avm	SAVERM_3586 putative 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase	418	5.0e-118
coel	SCO3148 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase	347	9.0e-97
sgr	SGR_4357 putative 4-(cytidine-5-diphospho)-2-C-methyl-D- erythritol kinase	406	2.0e-114
sace	SACE_0807 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	238	9.0e-64
nfar	nfa49010 putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	240	9.0e-65

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result

Model No. Description Position (aa) Score E-value

GHMP_kinases_C 1 GHMP kinases C terminal 203-278 34.2 2.2e-08

GHMP_kinases_N 1 GHMP kinases N terminal domain 87-145 25.7 9.1e-06

BLAST search result (top 10 hits)

ID Description Score E-value
WP_059079932.1 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase [St... 1064 1.5e-144
WP_046919756.1 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase [St... 1031 1.4e-139
WP_005485858.1 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase [St... 1029 2.4e-139
WP_060893182.1 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase [St... 1026 7.7e-139
WP_046709580.1 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase [St... 1026 7.8e-139
WP_037705570.1 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase [St... 1017 1.4e-137
WP_086761467.1 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase [St... 1015 3.9e-137
WP_009307366.1 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase [St... 1010 2.3e-136
WP_045556239.1 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase [St... 1004 1.9e-135
WP_033531960.1 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase [St... 1002 3.8e-135

PSORT result

Localization Certainty PSORT said
Not Clear

ID	SCAB53871	Type	CDS
From	4171105	nt length	915
To	4170191	aa length	304
Gene	cmek	pI	4.43
Definition	putative 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase	M.W (Da)	30508
Note		AseI frg.	D
SignalP v.4.0	Non-secretory protein \| plot	Category

Model	No.	Description	Position (aa)	Score	E-value
GHMP_kinases_C	1	GHMP kinases C terminal	203-278	34.2	2.2e-08
GHMP_kinases_N	1	GHMP kinases N terminal domain	87-145	25.7	9.1e-06