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IDSCAB55941 TypeCDS
From3905914 nt length282
To3905633 aa length93
Genehup pI10.15
Definitionputative DNA-binding protein Hu 1 M.W (Da)9821
Note AseI frg.J
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5127 putative DNA-binding protein Hu 11827.0e-48
coelSCO2950 hup DNA binding protein Hu (hs1)1834.0e-48
sgrSGR_4582 putative DNA-binding protein Hu 11598.0e-41

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Bac_DNA_binding1Bacterial DNA-binding protein1-9095.41.6e-27

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_004000874.1 MULTISPECIES: DNA-binding protein HU 1 [Streptomyces] >gb 4681.3e-60
WP_017947975.1 MULTISPECIES: DNA-binding protein HU 1 [Streptomyces] 4662.4e-60
WP_037703592.1 MULTISPECIES: integration host factor [Streptomyces] >gb 4653.0e-60
WP_077973054.1 integration host factor [Streptomyces tsukubensis] >gb 4644.5e-60
WP_093660571.1 integration host factor [Streptomyces wuyuanensis] >emb 4644.5e-60
WP_055512725.1 MULTISPECIES: integration host factor [Streptomyces] 4645.4e-60
WP_003950507.1 MULTISPECIES: DNA-binding protein HU 1 [Streptomyces] >ref 4645.4e-60
WP_086770499.1 integration host factor [Streptomyces bobili] 4636.3e-60
WP_046592951.1 integration host factor [Streptomyces mangrovisoli] >gb 4636.4e-60
WP_055606937.1 MULTISPECIES: integration host factor [Streptomyces] >gb 4637.9e-60

PSORT result

LocalizationCertaintyPSORT said
Not Clear