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IDSCAB57951 TypeCDS
From3697792 nt length1446
To3699237 aa length481
GenesidD pI5.25
Definitionputative lysine decarboxylase M.W (Da)52889
Note AseI frg.J
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5272 lysine decarboxylase8720.0e+00
coelSCO2782 lysine decarboxylase8480.0e+00
sgrSGR_4750 putative pyridoxal-dependent decarboxylase7980.0e+00
saceSACE_2888 aromatic-L-amino-acid decarboxylase1894.0e-49

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Pyridoxal_deC1Pyridoxal-dependent decarboxylase conserved domain62-402214.91.3e-63

SepSecS1O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS177-31325.73.7e-06

Aminotran_51Aminotransferase class-V142-26423.22.6e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_060907045.1 pyridoxal-dependent decarboxylase [Streptomyces scabiei] 24230.0e+00
WP_059083015.1 pyridoxal-dependent decarboxylase [Streptomyces scabiei] >db... 24160.0e+00
WP_037729545.1 pyridoxal-dependent decarboxylase [Streptomyces scabiei] >gb... 24150.0e+00
WP_086749219.1 pyridoxal-dependent decarboxylase [Streptomyces scabiei] 23390.0e+00
WP_037703378.1 pyridoxal-dependent decarboxylase [Streptomyces scabiei] >gb... 23350.0e+00
WP_046702764.1 pyridoxal-dependent decarboxylase [Streptomyces europaeiscab... 23310.0e+00
WP_005486495.1 desA protein [Streptomyces bottropensis] >gb 23310.0e+00
WP_046913331.1 pyridoxal-dependent decarboxylase [Streptomyces stelliscabie... 23280.0e+00
WP_060887123.1 MULTISPECIES: pyridoxal-dependent decarboxylase [Streptomyce... 23250.0e+00
WP_045557704.1 MULTISPECIES: pyridoxal-dependent decarboxylase [Streptomyce... 23230.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear