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IDSCAB58481 TypeCDS
From3641063 nt length891
To3641953 aa length296
Gene pI6.53
Definitionputative DNA-binding protein M.W (Da)32870
Note AseI frg.K
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5754 putative DNA-binding protein4007.0e-113
coelSCO6236 putative DNA binding protein (partial CDS)3694.0e-103

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain39-9938.01.4e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_041669736.1 XRE family transcriptional regulator [Streptomyces scabiei] 12961.9e-180
WP_061335342.1 XRE family transcriptional regulator [Streptomyces scabiei] 12953.1e-180
WP_037729571.1 XRE family transcriptional regulator [Streptomyces scabiei] ... 12935.9e-180
WP_060889166.1 XRE family transcriptional regulator [Streptomyces scabiei] 12928.7e-180
WP_078935281.1 XRE family transcriptional regulator [Streptomyces europaeis... 12232.5e-169
WP_079076573.1 XRE family transcriptional regulator [Streptomyces europaeis... 12232.7e-169
WP_033531308.1 XRE family transcriptional regulator [Streptomyces galbus] 11712.3e-161
WP_045557655.1 XRE family transcriptional regulator [Streptomyces sp. Fxana... 11703.1e-161
WP_059080966.1 XRE family transcriptional regulator [Streptomyces scabiei] ... 10758.4e-147
WP_005486422.1 XRE family transcriptional regulator [Streptomyces bottropen... 10732.2e-146

PSORT result

LocalizationCertaintyPSORT said
Not Clear