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IDSCAB58711 TypeCDS
From3614978 nt length747
To3615724 aa length248
GenerbsBC pI4.77
Definitionputative LacI-family transcriptional regulator, ribose operon repressor M.W (Da)24973
Note AseI frg.K
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5318 putative D-ribose ABC transporter substrate-binding protein/permease protein3661.0e-102
coelSCO2747 bifunctional carbohydrate binding and transport protein.3631.0e-101
sgrSGR_1095 putative D-ribose ABC transporter substrate-binding/permease protein3316.0e-92
saceSACE_5660 putative D-ribose ABC transporter permease protein2514.0e-68

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Peripla_BP_41Periplasmic binding protein domain6-225192.49.1e-57

Peripla_BP_31Periplasmic binding protein-like domain94-23948.88.4e-13

Peripla_BP_11Periplasmic binding proteins and sugar binding domain of LacI family9-21744.01.6e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_078580353.1 D-ribose ABC transporter substrate-binding protein [Streptom... 8551.2e-114
WP_079087633.1 D-ribose ABC transporter substrate-binding protein [Streptom... 8462.7e-113
KFG03211.1 ABC transporter substrate-binding protein [Streptomyces scabiei] 8438.2e-113
WP_078852563.1 D-ribose ABC transporter substrate-binding protein [Streptom... 8377.4e-112
WP_059080949.1 transporter [Streptomyces scabiei] >dbj 8381.0e-106
WP_060884617.1 MULTISPECIES: transporter [Streptomyces] 8153.4e-103
WP_046917428.1 transporter [Streptomyces stelliscabiei] >gb 8101.5e-102
WP_005486394.1 ribose ABC transporter permease [Streptomyces bottropensis] ... 8092.8e-102
WP_093790978.1 transporter [Streptomyces sp. cf124] >emb 8013.2e-101
WP_046708210.1 transporter [Streptomyces europaeiscabiei] 8004.4e-101

PSORT result

LocalizationCertaintyPSORT said
Not Clear