-- | --

IDSCAB60391 TypeCDS
From3415712 nt length855
To3414858 aa length284
GenecomEA pI11.27
Definitionputative exogenous DNA-binding protein M.W (Da)28997
Note AseI frg.K
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5491 putative exogenous DNA-binding protein3101.0e-85
coelSCO2568 putative DNA-binding protein.3155.0e-87
sgrSGR_4976 putative DNA-binding protein2054.0e-54
saceSACE_1435 competence protein ComEA helix-hairpin-helix region1272.0e-30
nfarnfa13820 putative DNA-binding protein956.0e-21

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HHH_31Helix-hairpin-helix motif222-28274.55.5e-21

HHH1Helix-hairpin-helix motif225-25039.62.5e-10

SLBB1SLBB domain142-19437.91.1e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_063775675.1 DNA-binding protein [Streptomyces scabiei] 7691.8e-100
KFG09854.1 hypothetical protein IQ61_06180 [Streptomyces scabiei] 7655.8e-98
WP_059081047.1 DNA-binding protein [Streptomyces scabiei] >dbj 7121.2e-91
WP_046918124.1 DNA-binding protein [Streptomyces stelliscabiei] 6557.7e-83
WP_005479284.1 membrane-bound DNA-binding protein [Streptomyces bottropensi... 6506.3e-82
KND45411.1 DNA-binding protein [Streptomyces stelliscabiei] 6542.0e-81
WP_009319775.1 comEA protein [Streptomyces ipomoeae] >gb 5911.9e-73
WP_076974286.1 DNA-binding protein [Streptomyces sp. M1013] 5902.0e-72
OMI88982.1 DNA-binding protein [Streptomyces sp. M1013] 5892.6e-72
WP_093456135.1 DNA-binding protein [Streptomyces sp. 2114.2] >emb 5849.0e-72

PSORT result

LocalizationCertaintyPSORT said
Not Clear