-- | --

IDSCAB65541 TypeCDS
From2904253 nt length549
To2903705 aa length182
Genesig pI10.17
Definitionputative RNA polymerase ECF sigma factor M.W (Da)20467
Note AseI frg.F
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4996 putative RNA polymerase ECF sigma factor1107.0e-26
saceSACE_1454 RNA polymerase ECF sigma factor1292.0e-31

*coel, Streptomyces coelicolor A3(2); sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r4_21Sigma-70, region 4113-16658.73e-16

Sigma70_r41Sigma-70, region 4119-16843.91.1e-11

Sigma70_r21Sigma-70 region 224-8333.42.6e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_033527347.1 SigE family RNA polymerase sigma factor [Streptomyces galbus... 8741.0e-119
WP_046709531.1 SigE family RNA polymerase sigma factor [Streptomyces europa... 8626.0e-118
WP_037704564.1 SigE family RNA polymerase sigma factor [Streptomyces scabie... 8574.0e-117
WP_086758384.1 SigE family RNA polymerase sigma factor [Streptomyces scabie... 8462.0e-115
WP_094218080.1 SigE family RNA polymerase sigma factor [Streptomyces diasta... 8243.7e-112
WP_033281874.1 SigE family RNA polymerase sigma factor [Streptomyces sp. NR... 8221.0e-111
WP_086803665.1 SigE family RNA polymerase sigma factor [Streptomyces scabie... 8151.2e-110
WP_043683652.1 SigE family RNA polymerase sigma factor [Streptomyces xyloph... 8141.5e-110
WP_028800849.1 SigE family RNA polymerase sigma factor [Streptomyces sp. 14... 8141.7e-110
WP_045557993.1 MULTISPECIES: SigE family RNA polymerase sigma factor [Strep... 8122.8e-110

PSORT result

LocalizationCertaintyPSORT said
Not Clear