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IDSCAB65891 TypeCDS
From2861621 nt length879
To2860743 aa length292
Gene pI4.96
Definitionputative DNA-binding protein M.W (Da)32186
Note AseI frg.F
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3141 putative DNA-binding protein2211.0e-58
coelSCO6629 hypothetical protein3293.0e-91
sgrSGR_4333 putative DNA-binding protein2255.0e-60

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain36-9150.41.9e-13

HTH_31Helix-turn-helix40-8625.41e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_041669883.1 XRE family transcriptional regulator [Streptomyces scabiei] 13550.0e+00
WP_060889219.1 XRE family transcriptional regulator [Streptomyces scabiei] 13430.0e+00
WP_060907208.1 XRE family transcriptional regulator [Streptomyces scabiei] 13400.0e+00
WP_037727812.1 XRE family transcriptional regulator [Streptomyces scabiei] ... 13280.0e+00
WP_062190118.1 XRE family transcriptional regulator [Streptomyces sp. AVP05... 13170.0e+00
ODA73922.1 hypothetical protein APS67_001848 [Streptomyces sp. AVP053U2] 13170.0e+00
GAP48228.1 helix-turn-helix domain-containing protein [Streptomyces azureus... 13010.0e+00
WP_059417493.1 XRE family transcriptional regulator [Streptomyces azureus] 12990.0e+00
WP_078852561.1 XRE family transcriptional regulator [Streptomyces scabiei] 12905.1e-180
WP_006136347.1 XRE family transcriptional regulator [Streptomyces gancidicu... 12823.0e-178

PSORT result

LocalizationCertaintyPSORT said
Not Clear