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IDSCAB68461 TypeCDS
From2570509 nt length648
To2569862 aa length215
Gene pI9.72
Definitionputative membrane protein M.W (Da)21835
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6172 putative membrane protein2646.0e-72
coelSCO2042 putative membrane protein2532.0e-68
sgrSGR_5466 conserved hypothetical protein1931.0e-50

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Trp_oprn_chp1Tryptophan-associated transmembrane protein (Trp_oprn_chp)30-210181.11.6e-53

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_059080651.1 TIGR02234 family membrane protein [Streptomyces scabiei] >db... 4017.2e-47
WP_046916384.1 TIGR02234 family membrane protein [Streptomyces stelliscabie... 3888.5e-45
WP_005478139.1 TIGR02234 family membrane protein [Streptomyces bottropensis... 3826.0e-44
WP_033528079.1 TIGR02234 family membrane protein [Streptomyces galbus] 3471.2e-38
WP_086754944.1 TIGR02234 family membrane protein [Streptomyces scabiei] 3442.8e-38
WP_048820601.1 TIGR02234 family membrane protein [Streptomyces ipomoeae] 3434.8e-38
WP_055711378.1 TIGR02234 family membrane protein [Streptomyces torulosus] 3426.4e-38
WP_037693305.1 TIGR02234 family membrane protein [Streptomyces scabiei] >gb... 3426.5e-38
WP_055536702.1 TIGR02234 family membrane protein [Streptomyces neyagawaensi... 3419.4e-38
WP_086804969.1 TIGR02234 family membrane protein [Streptomyces scabiei] 3382.5e-37

PSORT result

LocalizationCertaintyPSORT said
Not Clear