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IDSCAB69041 TypeCDS
From2499302 nt length2529
To2501830 aa length842
Gene pI9.46
Definitionputative ATP-dependent RNA helicase M.W (Da)88596
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6231 putative ATP-dependent RNA helicase11860.0e+00
coelSCO2000 putative ATP-binding RNA helicase6670.0e+00
sgrSGR_5532 putative ATP-dependent RNA helicase11290.0e+00
saceSACE_3130 ATP-dependent helicase HrpB7630.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HrpB_C1ATP-dependent helicase C-terminal695-827164.41.6e-48

HA21Helicase associated domain (HA2)403-46239.35.8e-10

Helicase_C1Helicase conserved C-terminal domain226-34038.31.3e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_037728063.1 ATP-dependent helicase HrpB [Streptomyces scabiei] >gb 31590.0e+00
WP_050399039.1 ATP-dependent helicase HrpB [Streptomyces stelliscabiei] >gb... 29200.0e+00
WP_005478039.1 ATP-dependent helicase HrpB [Streptomyces bottropensis] >gb 29150.0e+00
WP_020115229.1 ATP-dependent helicase HrpB [Streptomyces bottropensis] 29080.0e+00
WP_033527104.1 ATP-dependent helicase HrpB [Streptomyces galbus] 27990.0e+00
WP_037693232.1 ATP-dependent helicase HrpB [Streptomyces scabiei] >gb 27930.0e+00
WP_055711942.1 ATP-dependent helicase HrpB [Streptomyces torulosus] 26980.0e+00
WP_006381013.1 MULTISPECIES: ATP-dependent helicase HrpB [Streptomyces] >gb... 26260.0e+00
WP_093745644.1 ATP-dependent helicase HrpB [Streptomyces sp. PAN_FS17] >emb... 26050.0e+00
WP_086172191.1 ATP-dependent helicase HrpB [Streptomyces pharetrae] >gb 25990.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear