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IDSCAB69061 TypeCDS
From2498026 nt length1497
To2496530 aa length498
GenerpsA pI4.27
Definitionputative ribosomal protein S1 M.W (Da)54704
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6233 putative ribosomal protein S18940.0e+00
coelSCO1998 30S ribosomal protein S19070.0e+00
sgrSGR_5534 putative 30S ribosomal protein S18860.0e+00
saceSACE_5431 30S ribosomal protein S17770.0e+00
nfarnfa18970 putative ribosomal protein S17690.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

S14S1 RNA binding domain36-108, 124-191, 209-280, 294-366263.08.5e-80

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_005478037.1 30S ribosomal protein S1 [Streptomyces bottropensis] >gb 21180.0e+00
WP_066956593.1 30S ribosomal protein S1 [Streptomyces lushanensis] 21140.0e+00
WP_046504555.1 30S ribosomal protein S1 [Streptomyces sp. NRRL B-24891] 21140.0e+00
WP_037624739.1 30S ribosomal protein S1 [Streptomyces aureus] 21140.0e+00
WP_006381002.1 MULTISPECIES: 30S ribosomal protein S1 [Streptomyces] >gb 21140.0e+00
WP_053741436.1 30S ribosomal protein S1 [Streptomyces sp. NRRL WC-3618] >gb... 21100.0e+00
WP_086800035.1 30S ribosomal protein S1 [Streptomyces scabiei] 21090.0e+00
WP_055533929.1 30S ribosomal protein S1 [Streptomyces graminilatus] 21060.0e+00
WP_086754786.1 30S ribosomal protein S1 [Streptomyces scabiei] 21050.0e+00
WP_045555221.1 MULTISPECIES: 30S ribosomal protein S1 [Streptomyces] >dbj 21050.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear