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IDSCAB69261 TypeCDS
From2478834 nt length996
To2477839 aa length331
Gene pI6.62
Definitionputative DNA-binding protein M.W (Da)37151
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6253 putative DNA-binding protein4962.0e-141
coelSCO1979 putative DNA-binding protein5077.0e-145
sgrSGR_1055 putative DNA-binding protein4471.0e-126

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain60-11940.52.4e-10

HTH_31Helix-turn-helix66-11326.83.7e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_037728075.1 XRE family transcriptional regulator [Streptomyces scabiei] ... 13150.0e+00
WP_059084867.1 transcriptional regulator [Streptomyces scabiei] >dbj 13030.0e+00
WP_005478005.1 XRE family transcriptional regulator [Streptomyces bottropen... 12993.4e-180
WP_046919743.1 XRE family transcriptional regulator [Streptomyces stellisca... 12761.2e-176
WP_046709658.1 XRE family transcriptional regulator [Streptomyces europaeis... 12654.5e-175
WP_037693197.1 XRE family transcriptional regulator [Streptomyces scabiei] ... 12611.9e-174
WP_086750160.1 XRE family transcriptional regulator [Streptomyces scabiei] 12507.9e-173
WP_086760356.1 XRE family transcriptional regulator [Streptomyces scabiei] 12491.2e-172
WP_033527088.1 XRE family transcriptional regulator [Streptomyces galbus] 12333.1e-170
WP_086800855.1 XRE family transcriptional regulator [Streptomyces scabiei] 12125.2e-167

PSORT result

LocalizationCertaintyPSORT said
Not Clear