ID	SCAB72451	Type	CDS
From	2133241	nt length	543
To	2132699	aa length	180
Gene	sig	pI	8.49
Definition	putative RNA polymerase sigma factor	M.W (Da)	20447
Note		AseI frg.	A
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r2	1	Sigma-70 region 2	26-88	61.7	3.7e-17
	Sigma70_r4_2	1	Sigma-70, region 4	119-172	55.1	3.9e-15
	Sigma70_r4	1	Sigma-70, region 4	125-174	50.5	1e-13
	Sigma70_ECF	1	ECF sigma factor	5-165	23.8	3.2e-05

BLAST search result (top 10 hits)

ID	Description	Score	E-value
GAQ64623.1	ECF RNA polymerase sigma factor SigK [Streptomyces scabiei]	828	1.9e-112
WP_005485063.1	sigma factor [Streptomyces bottropensis] >gb	822	7.4e-112
WP_060885296.1	MULTISPECIES: RNA polymerase subunit sigma [Streptomyces]	820	1.6e-111
WP_046915918.1	RNA polymerase sigma factor SigK [Streptomyces stelliscabiei...	818	3.0e-111
WP_045557003.1	MULTISPECIES: RNA polymerase sigma factor SigK [Streptomyces...	816	7.6e-111
WP_086763085.1	RNA polymerase subunit sigma [Streptomyces scabiei]	812	3.0e-110
WP_086799551.1	RNA polymerase subunit sigma [Streptomyces scabiei]	809	7.8e-110
WP_046705009.1	RNA polymerase sigma factor SigK [Streptomyces europaeiscabi...	808	1.2e-109
WP_037702005.1	RNA polymerase sigma factor SigK [Streptomyces scabiei] >gb	804	4.2e-109
WP_033531579.1	RNA polymerase sigma factor SigK [Streptomyces galbus]	803	5.6e-109

PSORT result

Localization	Certainty	PSORT said
Not Clear

---