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IDSCAB74361 TypeCDS
From1922955 nt length561
To1922395 aa length186
Genesig pI8.35
Definitionputative RNA polymerase sigma factor M.W (Da)20020
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6785 putative RNA polymerase ECF-subfamily sigma factor2115.0e-56
coelSCO1564 putative RNA polymerase sigma factor1961.0e-51
sgrSGR_5974 putative RNA polymerase ECF-subfamily sigma factor1392.0e-34
saceSACE_6998 RNA polymerase sigma factor762.0e-15

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
SFM78733.1 RNA polymerase sigma factor, sigma-70 family [Streptomyces sp. c... 5773.0e-74
WP_037725641.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sc... 5728.8e-74
WP_059081950.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sc... 5535.4e-71
WP_005485356.1 sigma-70 family RNA polymerase sigma factor [Streptomyces bo... 5476.1e-70
WP_046919557.1 sigma-70 family RNA polymerase sigma factor [Streptomyces st... 5432.1e-69
WP_046702668.1 sigma-70 family RNA polymerase sigma factor [Streptomyces eu... 5241.6e-66
WP_037701613.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sc... 5144.8e-65
WP_055540208.1 sigma-70 family RNA polymerase sigma factor [Streptomyces ne... 5007.8e-63
WP_055711149.1 sigma-70 family RNA polymerase sigma factor [Streptomyces to... 4999.3e-63
WP_033532634.1 sigma-70 family RNA polymerase sigma factor [Streptomyces ga... 4981.4e-62

PSORT result

LocalizationCertaintyPSORT said
Not Clear