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IDSCAB75161 TypeCDS
From1837896 nt length435
To1837462 aa length144
GenenusB pI5
Definitionputative transcription termination protein M.W (Da)16469
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6860 putative transcription termination protein2639.0e-72
coelSCO1490 putative NusB-family protein2669.0e-73
sgrSGR_6044 putative NusB-family protein2282.0e-61
saceSACE_2076 NusB antitermination factor1443.0e-36
nfarnfa36310 putative transcription termination factor1182.0e-28

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

NusB1NusB family6-133117.83.4e-34

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_060907449.1 transcription antitermination factor NusB [Streptomyces scab... 7532.0e-102
WP_059083357.1 transcription antitermination factor NusB [Streptomyces scab... 7505.2e-102
WP_037701424.1 transcription antitermination factor NusB [Streptomyces scab... 7497.7e-102
WP_046704747.1 transcription antitermination factor NusB [Streptomyces euro... 7443.8e-101
WP_060892029.1 transcription antitermination factor NusB [Streptomyces euro... 7392.6e-100
WP_005485475.1 transcription antitermination factor NusB [Streptomyces bott... 7359.6e-100
WP_046918273.1 transcription antitermination factor NusB [Streptomyces stel... 7351.0e-99
WP_045557246.1 MULTISPECIES: transcription antitermination factor NusB [Str... 7262.8e-98
WP_055542045.1 MULTISPECIES: transcription antitermination factor NusB [Str... 7236.7e-98
WP_086756121.1 transcription antitermination factor NusB [Streptomyces scab... 7229.3e-98

PSORT result

LocalizationCertaintyPSORT said
Not Clear