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IDSCAB75261 TypeCDS
From1826377 nt length324
To1826054 aa length107
Gene pI11.15
Definitionputative integration host factor M.W (Da)11555
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6870 putative integration host factor2065.0e-55
coelSCO1480 conserved hypothetical protein2094.0e-56
sgrSGR_6054 putative integration host factor2021.0e-53
saceSACE_2099 putative integration host factor982.0e-22
nfarnfa36170 putative integration host factor804.0e-17

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_093775871.1 30S ribosomal protein S13 [Streptomyces sp. yr375] >emb 4214.4e-53
WP_026246651.1 MULTISPECIES: 30S ribosomal protein S13 [Streptomyces] >emb 4181.3e-52
WP_019059734.1 MULTISPECIES: 30S ribosomal protein S13 [Streptomyces] >dbj 4181.5e-52
WP_058079834.1 30S ribosomal protein S13 [Streptomyces hygroscopicus] >gb 4171.8e-52
WP_006607450.1 MULTISPECIES: hypothetical protein [Streptomyces] >gb 4172.3e-52
WP_037651003.1 MULTISPECIES: 30S ribosomal protein S13 [Streptomyces] >emb 4162.5e-52
WP_018836707.1 MULTISPECIES: 30S ribosomal protein S13 [Streptomyces] >gb 4162.7e-52
WP_046704738.1 30S ribosomal protein S13 [Streptomyces europaeiscabiei] 4163.1e-52
WP_030420865.1 MULTISPECIES: 30S ribosomal protein S13 [Streptomyces] >gb 4163.3e-52
WP_019884813.1 30S ribosomal protein S13 [Streptomyces purpureus] 4163.4e-52

PSORT result

LocalizationCertaintyPSORT said
Not Clear