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IDSCAB75281 TypeCDS
From1825335 nt length270
To1825066 aa length89
GenerpoZ pI4.38
DefinitionRNA polymerase omega subunit M.W (Da)9566
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6872 RNA polymerase omega subunit1742.0e-45
coelSCO1478 putative RNA polymerase omega subunit1764.0e-46
sgrSGR_6056 putative RNA polymerase omega subunit1742.0e-45
saceSACE_2101 DNA-directed RNA polymerase subunit omega1211.0e-29
nfarnfa36150 putative RNA polymerase omega subunit1133.0e-27

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RNA_pol_Rpb61RNA polymerase Rpb618-8054.66.9e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003988945.1 MULTISPECIES: DNA-directed RNA polymerase subunit omega [Str... 4496.8e-58
WP_019059732.1 MULTISPECIES: DNA-directed RNA polymerase subunit omega [Str... 4471.4e-57
WP_003977348.1 MULTISPECIES: DNA-directed RNA polymerase subunit omega [Str... 4471.4e-57
WP_003982715.1 MULTISPECIES: DNA-directed RNA polymerase subunit omega [Str... 4471.5e-57
WP_033321800.1 DNA-directed RNA polymerase subunit omega [Streptomyces yere... 4461.9e-57
WP_030247008.1 MULTISPECIES: DNA-directed RNA polymerase subunit omega [Str... 4462.0e-57
WP_066985704.1 DNA-directed RNA polymerase subunit omega [Streptomyces sp. ... 4462.2e-57
WP_006382157.1 MULTISPECIES: DNA-directed RNA polymerase subunit omega [Str... 4462.4e-57
WP_055541593.1 MULTISPECIES: DNA-directed RNA polymerase subunit omega [Str... 4452.6e-57
WP_030316319.1 MULTISPECIES: DNA-directed RNA polymerase subunit omega [Str... 4452.8e-57

PSORT result

LocalizationCertaintyPSORT said
Not Clear